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<TITLE>BLAST Search Results </TITLE>
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<BODY BGCOLOR="#FFFFFF" LINK="#0000FF" VLINK="#660099" ALINK="#660099">
<A HREF="http://www.ncbi.nlm.nih.gov/BLAST/blast_form.map"> <IMG SRC="http://www.ncbi.nlm.nih.gov/BLAST/blast_results.gif" BORDER=0 ISMAP></A>
<BR><BR><PRE>
<b>BLASTP 2.0.10 [Aug-26-1999]</b>


<b><a href="http://www.ncbi.nlm.nih.gov/htbin-
post/Entrez/query?uid=9254694&form=6&db=m&Dopt=r">Reference</a>:</b>
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Sch&auml;ffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
<p>
<b>Query=</b> gi|134196|sp|P23832|SAMB_SALTY SAMB PROTEIN.
         (424 letters)

<b>Database:</b> Non-redundant SwissProt sequences
           82,258 sequences; 29,652,561 total letters

<p> <p>If you have any problems or questions with the results of this search <br>please refer to the <b><a href=http://www.ncbi.nlm.nih.gov/BLAST/blast_FAQs.html>BLAST FAQs</a></b><br><p>
<FORM NAME="BLASTFORM">
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<CENTER>
<H3><a href="/BLAST/newoptions.html#graphical-overview"> Distribution of 13 Blast Hits on the Query Sequence</a></H3>
<input name=defline size=80 value="Mouse-over to show defline and scores. Click to show alignments">
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<map name=img_map>
<area shape=rect coords=69,101,523,106 href="#134196" ONMOUSEOVER='document.BLASTFORM.defline.value="P23832  SAMB PROTEIN..S= 862 E=0.0"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=69,108,522,113 href="#124421" ONMOUSEOVER='document.BLASTFORM.defline.value="P18642  IMPB PROTEIN..S= 621 E=1e-177"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=69,115,521,120 href="#2507535" ONMOUSEOVER='document.BLASTFORM.defline.value="P04152  UMUC PROTEIN..S= 521 E=8e-148"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=69,122,521,127 href="#137026" ONMOUSEOVER='document.BLASTFORM.defline.value="P22494  UMUC PROTEIN..S= 515 E=5e-146"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=69,129,522,134 href="#127507" ONMOUSEOVER='document.BLASTFORM.defline.value="P14303  MUCB PROTEIN..S= 447 E=2e-125"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=69,136,522,141 href="#127505" ONMOUSEOVER='document.BLASTFORM.defline.value="P07375  MUCB PROTEIN..S= 444 E=2e-124"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=72,143,479,148 href="#1731083" ONMOUSEOVER='document.BLASTFORM.defline.value="P54560  HYPOTHETICAL 45.9 KD PROTEIN IN GLNQ-ANSR INTERGENIC REG..S= 106 E=1e-22"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=74,150,346,155 href="#1731071" ONMOUSEOVER='document.BLASTFORM.defline.value="P54545  HYPOTHETICAL 47.0 KD PROTEIN IN GLNQ-ANSR INTERGENIC REG..S=92.4 E=1e-18"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=74,157,424,162 href="#2501652" ONMOUSEOVER='document.BLASTFORM.defline.value="Q47155  DNA-DAMAGE-INDUCIBLE PROTEIN P..S=65.6 E=2e-10"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=69,164,427,169 href="#2501651" ONMOUSEOVER='document.BLASTFORM.defline.value="P75241  HYPOTHETICAL PROTEIN MG360 HOMOLOG..S=56.6 E=9e-08"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=69,171,430,176 href="#2501650" ONMOUSEOVER='document.BLASTFORM.defline.value="Q49426  HYPOTHETICAL PROTEIN MG360..S=41.8 E=0.002"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
<area shape=rect coords=74,178,286,183 href="#465873" ONMOUSEOVER='document.BLASTFORM.defline.value="P34409  HYPOTHETICAL 59.1 KD PROTEIN F22B7.6 IN CHROMOSOME III..S=34.4 E=0.42"' ONMOUSEOUT='document.BLASTFORM.defline.value="Mouse-over to show defline and scores. Click to show alignments"' >
</map>
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<IMG WIDTH=529 HEIGHT=185 USEMAP=#img_map BORDER=1 SRC="nph-getgif.cgi?iblast0&20789170539406.gif" ISMAP></CENTER>
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<PRE>
<PRE>

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00134196&dopt=GenPept">sp|P23832|SAMB_SALTY</a>  SAMB PROTEIN                                <a href = #134196>862</a>  0.0
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00124421&dopt=GenPept">sp|P18642|IMPB_SALTY</a>  IMPB PROTEIN                                <a href = #124421>621</a>  e-177
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=02507535&dopt=GenPept">sp|P04152|UMUC_ECOLI</a>  UMUC PROTEIN                                <a href = #2507535>521</a>  e-148
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00137026&dopt=GenPept">sp|P22494|UMUC_SALTY</a>  UMUC PROTEIN                                <a href = #137026>515</a>  e-146
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00127507&dopt=GenPept">sp|P14303|MUCB_SALTY</a>  MUCB PROTEIN                                <a href = #127507>447</a>  e-125
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00127505&dopt=GenPept">sp|P07375|MUCB_ECOLI</a>  MUCB PROTEIN                                <a href = #127505>444</a>  e-124
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01731083&dopt=GenPept">sp|P54560|YQJW_BACSU</a>  HYPOTHETICAL 45.9 KD PROTEIN IN GLNQ-A...   <a href = #1731083>106</a>  1e-22
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01731071&dopt=GenPept">sp|P54545|YQJH_BACSU</a>  HYPOTHETICAL 47.0 KD PROTEIN IN GLNQ-A...   <a href = #1731071> 92</a>  1e-18
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=02501652&dopt=GenPept">sp|Q47155|DINP_ECOLI</a>  DNA-DAMAGE-INDUCIBLE PROTEIN P              <a href = #2501652> 66</a>  2e-10
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=02501651&dopt=GenPept">sp|P75241|Y360_MYCPN</a>  HYPOTHETICAL PROTEIN MG360 HOMOLOG          <a href = #2501651> 57</a>  9e-08
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=02501650&dopt=GenPept">sp|Q49426|Y360_MYCGE</a>  HYPOTHETICAL PROTEIN MG360                  <a href = #2501650> 42</a>  0.002
<a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00465873&dopt=GenPept">sp|P34409|YLW6_CAEEL</a>  HYPOTHETICAL 59.1 KD PROTEIN F22B7.6 I...   <a href = #465873> 34</a>  0.42

<PRE>
<a name = 134196> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00134196&dopt=GenPept">sp|P23832|SAMB_SALTY</a> SAMB PROTEIN
           Length = 424
           
 Score =  862 bits (2204), Expect = 0.0
 Identities = 424/424 (100%), Positives = 424/424 (100%)

Query: 1   MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIPRSAEAKKLGIKMGVPWFQLRS 60
           MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIPRSAEAKKLGIKMGVPWFQLRS
Sbjct: 1   MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIPRSAEAKKLGIKMGVPWFQLRS 60

Query: 61  AKFPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFG 120
           AKFPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFG
Sbjct: 61  AKFPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFG 120

Query: 121 RQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRTEKLLSLQ 180
           RQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRTEKLLSLQ
Sbjct: 121 RQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRTEKLLSLQ 180

Query: 181 PVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEE 240
           PVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEE
Sbjct: 181 PVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEE 240

Query: 241 APPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFAV 300
           APPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFAV
Sbjct: 241 APPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFAV 300

Query: 301 TEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQLN 360
           TEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQLN
Sbjct: 301 TEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQLN 360

Query: 361 LFDEVQPRERSEQLMQVLDGINHPGKGKIWFAGRGIAPEWQMKRELLSPAYTTRWADIPA 420
           LFDEVQPRERSEQLMQVLDGINHPGKGKIWFAGRGIAPEWQMKRELLSPAYTTRWADIPA
Sbjct: 361 LFDEVQPRERSEQLMQVLDGINHPGKGKIWFAGRGIAPEWQMKRELLSPAYTTRWADIPA 420

Query: 421 AKLT 424
           AKLT
Sbjct: 421 AKLT 424
</PRE>


<PRE>
<a name = 124421> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00124421&dopt=GenPept">sp|P18642|IMPB_SALTY</a> IMPB PROTEIN
           Length = 424
           
 Score =  621 bits (1583), Expect = e-177
 Identities = 298/423 (70%), Positives = 349/423 (82%)

Query: 1   MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIPRSAEAKKLGIKMGVPWFQLRS 60
           MFALAD+NSFYASCEKVFRPDLR+  V+VLSNNDGCVI RS EAK LGI+MG PWFQ+R 
Sbjct: 1   MFALADINSFYASCEKVFRPDLRNEPVIVLSNNDGCVIARSPEAKALGIRMGQPWFQVRQ 60

Query: 61  AKFPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFG 120
            +  + +  FSSNYALY SMS RVM  LE L+P VE YSIDEMF+D+RGI+ CI  E FG
Sbjct: 61  MRLEKKIHVFSSNYALYHSMSQRVMAVLESLSPAVEPYSIDEMFIDLRGINHCISPEFFG 120

Query: 121 RQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRTEKLLSLQ 180
            QLRE V+S TGLT+GVG+ PTKTLAKSAQWA+K+W QF GV+ALT  N+ R  KLL LQ
Sbjct: 121 HQLREQVKSWTGLTMGVGIAPTKTLAKSAQWATKQWPQFSGVVALTAENRNRILKLLGLQ 180

Query: 181 PVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEE 240
           PV E+WGVG R+++KLN +GI TALQLA+AN  FIRKNF+V+LERTVRELNGESCISLEE
Sbjct: 181 PVGEVWGVGHRLTEKLNALGINTALQLAQANTAFIRKNFSVILERTVRELNGESCISLEE 240

Query: 241 APPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFAV 300
           APP KQQIVCSRSFGER+T  +AM QAV Q+AERAAEKLRGERQ+CR +  FV+TSPFAV
Sbjct: 241 APPAKQQIVCSRSFGERITDKDAMHQAVVQYAERAAEKLRGERQYCRQVTTFVRTSPFAV 300

Query: 301 TEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQLN 360
            EP Y N A EKL +PTQD+RDIIAAA RAL+ +W +G+RY KAG ML DFTP+G++Q  
Sbjct: 301 KEPCYSNAAVEKLPLPTQDSRDIIAAACRALNHVWREGYRYMKAGVMLADFTPSGIAQPG 360

Query: 361 LFDEVQPRERSEQLMQVLDGINHPGKGKIWFAGRGIAPEWQMKRELLSPAYTTRWADIPA 420
           LFDE+QPR+ SE+LM+ LD +N  GKGK+WFAGRG APEWQMKRE+LS  YTT+W DIP 
Sbjct: 361 LFDEIQPRKNSEKLMKTLDELNQSGKGKVWFAGRGTAPEWQMKREMLSQCYTTKWRDIPL 420

Query: 421 AKL 423
           A+L
Sbjct: 421 ARL 423
</PRE>


<PRE>
<a name = 2507535> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=02507535&dopt=GenPept">sp|P04152|UMUC_ECOLI</a> UMUC PROTEIN
           Length = 422
           
 Score =  521 bits (1328), Expect = e-148
 Identities = 265/424 (62%), Positives = 318/424 (74%), Gaps = 4/424 (0%)

Query: 1   MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIPRSAEAKKLGIKMGVPWFQLRS 60
           MFAL DVN+FYASCE VFRPDL  + VVVLSNNDGCVI R+AEAK LG+KMG PWF+ + 
Sbjct: 1   MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60

Query: 61  AKFPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFG 120
                 V+ FSSNY LYA MSNRVM  LEEL+PRVE YSIDE F D+ G+ +C D  DFG
Sbjct: 61  LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120

Query: 121 RQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWS-QFGGVLALTLHNQKRTEKLLSL 179
           R++R  V   T LT+GVG+  TKTLAK A  A+K+W  Q GGV+ L+  N +R  KL+S 
Sbjct: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLMSA 178

Query: 180 QPVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLE 239
            PV+++WG+GRRISKKL+ MGI T L LA  +  FIRK+FNVVLERTVREL GE C+ LE
Sbjct: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238

Query: 240 EAPPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFA 299
           E  P KQ+I+CSRSFGER+T Y +MRQA+C +A RAAEKLR E Q+CR I+ F+KTSPFA
Sbjct: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298

Query: 300 VTEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQL 359
           + EPYYGN AS KLL PTQD+RDII AA R+LD IW  GHRY KAG ML DF   GV+QL
Sbjct: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358

Query: 360 NLFDEVQPRERSEQLMQVLDGIN-HPGKGKIWFAGRGIAPEWQMKRELLSPAYTTRWADI 418
           NLFD+  PR  SEQLM V+D +N   G+G ++FAG+GI  +WQMKR +LSP YTTR +D+
Sbjct: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418

Query: 419 PAAK 422
              K
Sbjct: 419 LRVK 422
</PRE>


<PRE>
<a name = 137026> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00137026&dopt=GenPept">sp|P22494|UMUC_SALTY</a> UMUC PROTEIN
           Length = 422
           
 Score =  515 bits (1313), Expect = e-146
 Identities = 267/424 (62%), Positives = 317/424 (73%), Gaps = 4/424 (0%)

Query: 1   MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIPRSAEAKKLGIKMGVPWFQLRS 60
           MFAL DVNSFYASCE VFRPDL  R VVVLSNNDGCVI  SAEAK+LGI  G P+F+ + 
Sbjct: 1   MFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAPGEPYFKQKE 60

Query: 61  AKFPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFG 120
                 V+ FSSNY LYA MSNRVM  LEE+ PRVE YSIDE F D+ G+ +C D  DFG
Sbjct: 61  RFRRSGVVCFSSNYELYADMSNRVMTTLEEMVPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120

Query: 121 RQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWS-QFGGVLALTLHNQKRTEKLLSL 179
           R++R  V   T LT+GVG+  TKTLAK A  A+K+W  Q  GV+ L+  N  R  +LL+L
Sbjct: 121 REIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTDGVVDLS--NIDRQRRLLAL 178

Query: 180 QPVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLE 239
            PVE++WGVGRRISKKLN +GI TAL L+  +   IRK+FNVVLERTVREL GE C+ LE
Sbjct: 179 IPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELE 238

Query: 240 EAPPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFA 299
           E  P KQ+IVCSRSFGERVT YE MRQAV  +A RAAEKLRGE Q+CR I+ FVKTSPFA
Sbjct: 239 EFAPAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCRFISTFVKTSPFA 298

Query: 300 VTEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQL 359
           + EPYYGN A+  LL PTQD+RDII AAV+ LD+IW DGHRY KAG ML DF   GV+QL
Sbjct: 299 LNEPYYGNSAAVTLLTPTQDSRDIINAAVKCLDKIWRDGHRYQKAGVMLGDFFSQGVAQL 358

Query: 360 NLFDEVQPRERSEQLMQVLDGIN-HPGKGKIWFAGRGIAPEWQMKRELLSPAYTTRWADI 418
           NLFD+  PR  S +LM+VLD +N   GKG ++FAG+G++ +W MKRE+LSP YTTR++D+
Sbjct: 359 NLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQWAMKREMLSPRYTTRYSDL 418

Query: 419 PAAK 422
              K
Sbjct: 419 LRVK 422
</PRE>


<PRE>
<a name = 127507> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00127507&dopt=GenPept">sp|P14303|MUCB_SALTY</a> MUCB PROTEIN
           Length = 421
           
 Score =  447 bits (1137), Expect = e-125
 Identities = 239/423 (56%), Positives = 292/423 (68%), Gaps = 3/423 (0%)

Query: 1   MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIPRSAEAKKLGIKMGVPWFQLRS 60
           MFAL DVN  YASCE+ FRPDL +R+V VLSNNDG ++ R+  AKK G+KMG P+F++R 
Sbjct: 1   MFALIDVNGMYASCEQAFRPDLANRAVAVLSNNDGNIVARNYLAKKAGLKMGDPYFKVRP 60

Query: 61  AKFPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFG 120
                 +  FSSNY LYASMS R    +E LA  VEQYSIDE+F+D +GI + +  + FG
Sbjct: 61  IIERHNIAIFSSNYTLYASMSARFAAVVESLASHVEQYSIDELFVDCKGITAAMSLDAFG 120

Query: 121 RQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRTEKLLSLQ 180
           RQLRE VR  T L  GVG+  TKTLAK    A+K W   GGV+AL   +  R +KL+S+ 
Sbjct: 121 RQLREEVRRHTTLVCGVGIARTKTLAKLCNHAAKTWPATGGVVALD--DGARLKKLMSIL 178

Query: 181 PVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEE 240
           PV E+WGVG R  K L TMGI T L LARA+   IRK F VVLERTVREL GE+C SLEE
Sbjct: 179 PVAEVWGVGHRTEKALATMGIKTVLDLARADTRLIRKTFGVVLERTVRELRGEACFSLEE 238

Query: 241 APPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFAV 300
            PP KQQIV SRSFG+RV T   M+QAV   A RAAEKLR ERQ+CR I+VF++TSP++V
Sbjct: 239 NPPAKQQIVVSRSFGQRVETLTDMQQAVTGFAARAAEKLRNERQYCRVISVFIRTSPYSV 298

Query: 301 TEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQLN 360
            +  Y N A+EKL + TQD+R II AA  AL RIW +   YAKAG ML DF+    +QL+
Sbjct: 299 RDTQYANQATEKLTVATQDSRTIIQAAQAALARIWREDIAYAKAGVMLADFSGK-EAQLD 357

Query: 361 LFDEVQPRERSEQLMQVLDGINHPGKGKIWFAGRGIAPEWQMKRELLSPAYTTRWADIPA 420
           LFD   P   SE LM VLDGIN  GK +++FAG+GI   + M+R++LSP YTT W  IP 
Sbjct: 358 LFDSATPSAGSEALMAVLDGINRRGKNQLFFAGQGIDNSFAMRRQMLSPDYTTDWRSIPI 417

Query: 421 AKL 423
           A +
Sbjct: 418 ATI 420
</PRE>


<PRE>
<a name = 127505> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00127505&dopt=GenPept">sp|P07375|MUCB_ECOLI</a> MUCB PROTEIN
           Length = 420
           
 Score =  444 bits (1129), Expect = e-124
 Identities = 239/423 (56%), Positives = 293/423 (68%), Gaps = 4/423 (0%)

Query: 1   MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIPRSAEAKKLGIKMGVPWFQLRS 60
           MFAL DVN  YASCE+ FRPDL +R+V VLSNNDG ++ R+  AKK G+KMG P+F++R 
Sbjct: 1   MFALIDVNGMYASCEQAFRPDLANRAVAVLSNNDGNIVARNYLAKKAGLKMGDPYFKVRP 60

Query: 61  AKFPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFG 120
                 +  FSSNY LYASMS R    +E LA  VEQYSIDE+F+D +GI + +  + FG
Sbjct: 61  IIERHNIAIFSSNYTLYASMSARFAAVVESLASHVEQYSIDELFVDCKGITAAMSLDAFG 120

Query: 121 RQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRTEKLLSLQ 180
           RQLRE VR  T L  GVG+  TKTLAK    A+K W   GGV+AL   +  R +KL+S+ 
Sbjct: 121 RQLREEVRRHTTLVCGVGIARTKTLAKLCNHAAKTWPATGGVVALD--DGARLKKLMSIL 178

Query: 181 PVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEE 240
           PV E+WGVG R  K L TMGI T L LARA+   IRK F VVLERTVREL GE+C SLEE
Sbjct: 179 PVAEVWGVGHRTEKALATMGIKTVLDLARADTRLIRKTFGVVLERTVRELRGEACFSLEE 238

Query: 241 APPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFAV 300
            PP KQQIV SRSFG+RV T   M+QAV   A RAAEKLR ERQ+CR I+VF++TSP++V
Sbjct: 239 NPPAKQQIVVSRSFGQRVETLTDMQQAVTGFAARAAEKLRNERQYCRVISVFIRTSPYSV 298

Query: 301 TEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQLN 360
            +  Y N A+EKL + TQD+R II AA +AL RIW +   YAKAG ML DF+    +QL+
Sbjct: 299 RDTQYANQATEKLTVATQDSRTIIQAA-QALARIWREDIAYAKAGVMLADFSGK-EAQLD 356

Query: 361 LFDEVQPRERSEQLMQVLDGINHPGKGKIWFAGRGIAPEWQMKRELLSPAYTTRWADIPA 420
           LFD   P   SE LM VLDGIN  GK +++FAG+GI   + M+R++LSP YTT W  IP 
Sbjct: 357 LFDSATPSAGSEALMAVLDGINRRGKNQLFFAGQGIDNSFAMRRQMLSPDYTTDWRSIPI 416

Query: 421 AKL 423
           A +
Sbjct: 417 ATI 419
</PRE>


<PRE>
<a name = 1731083> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01731083&dopt=GenPept">sp|P54560|YQJW_BACSU</a> HYPOTHETICAL 45.9 KD PROTEIN IN GLNQ-ANSR INTERGENIC REGION
           Length = 412
           
 Score =  106 bits (261), Expect = 1e-22
 Identities = 107/393 (27%), Positives = 171/393 (43%), Gaps = 33/393 (8%)

Query: 4   LADVNSFYASCEKVFRPDLRDRSVVVLSNND---GCVIPRSAEAKKLGIKMGVPWFQLRS 60
           L D+ SFYAS EK   P L++R V+V  + +   G V+     AK+ G+      ++ + 
Sbjct: 9   LVDMQSFYASVEKAENPHLKNRPVIVSGDPEKRGGVVLAACPLAKQKGVVNASRLWEAQE 68

Query: 61  AKFPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFE-DF 119
            K PE V+        Y  +S ++   LEE    VE YSIDE F+DI G         + 
Sbjct: 69  -KCPEAVV-LRPRMQRYIDVSLQITAILEEYTDLVEPYSIDEQFMDITGSQKLFGTPMEI 126

Query: 120 GRQLREHVRSGTGLTIGVGMGPTKTLAKSA--QWASKEWSQFGGVLALTLHNQKRTEKLL 177
            + ++  +    G+   VG+GP K LAK A   +A K  +   G+  LT  N K     L
Sbjct: 127 AKSIQGRIMREIGVYARVGIGPNKALAKIACDNFAKKNKN---GIFTLTKENMKTEMWPL 183

Query: 178 SLQPVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCIS 237
              PV  ++GVG R+   LN MGI+T   LA      ++K + +         NG     
Sbjct: 184 ---PVGSMFGVGSRMKHHLNRMGISTIGGLAAFPLDLLKKKWGINGHVLWMTANG----- 235

Query: 238 LEEAPPPKQQIVCSRSFGERVT---TYE----AMRQAVCQHAERAAEKLRGERQFCRHIA 290
           ++ +P     +   ++ G  +T    YE     ++  + + +E    + R      + ++
Sbjct: 236 IDYSPVSTSSLDGQKAIGHGMTLPRDYEHFDKEIKVVLLELSEEVCRRSRNAGVMGQTVS 295

Query: 291 VFVKTSPFAVTEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLND 350
           V  + + F     +   +   KL  PT  T+D+  A  R     W DG    + G  L+ 
Sbjct: 296 VSCRGADFDWPTGFNRQV---KLAEPTNSTQDVYEAVRRLFLTFW-DGKPVRRLGVNLSQ 351

Query: 351 FTPTGVSQLNLFDEVQPRERSEQLMQVLDGINH 383
            +   + QLNLF   Q   +   L  V+DGI +
Sbjct: 352 LSSDDIWQLNLF---QDYAKKMSLGYVMDGIKN 381
</PRE>


<PRE>
<a name = 1731071> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=01731071&dopt=GenPept">sp|P54545|YQJH_BACSU</a> HYPOTHETICAL 47.0 KD PROTEIN IN GLNQ-ANSR INTERGENIC REGION
           Length = 414
           
 Score = 92.4 bits (226), Expect = 1e-18
 Identities = 73/257 (28%), Positives = 121/257 (46%), Gaps = 17/257 (6%)

Query: 6   DVNSFYASCEKVFRPDLRDRSVVVLSN---NDGCVIPRSAEAKKLGIKMGVPWFQLRSAK 62
           D+NSFYAS E  + P LR + V V  N     G V+  S EA+  G+K  +P +Q +   
Sbjct: 12  DMNSFYASVEMAYDPALRGKPVAVAGNVKERKGIVVTCSYEARARGVKTTMPVWQAKR-H 70

Query: 63  FPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFGRQ 122
            PE +I    N+  Y + S  +   L E    VE  SIDE ++D+          +  ++
Sbjct: 71  CPE-LIVLPPNFDRYRNSSRAMFTILREYTDLVEPVSIDEGYMDMTDTPYSSRALETAKE 129

Query: 123 LREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRTEKLLSLQPV 182
           ++  ++    L   +G+ P K LAK A    K        L +T+  +++   +L   PV
Sbjct: 130 IQSRLQKELLLPSSIGIAPNKFLAKMASDMKKP-------LGITILRKRQVPDILWPLPV 182

Query: 183 EEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEEAP 242
            E+ GVG++ ++KL  +GI T  +LA A+   +++   +   R   + NG     +  AP
Sbjct: 183 GEMHGVGKKTAEKLKGLGIHTIGELAAADEHSLKRLLGINGPRLKNKANG-----IHHAP 237

Query: 243 PPKQQIVCSRSFGERVT 259
              ++I   +S G   T
Sbjct: 238 VDPERIYEFKSVGNSST 254
</PRE>


<PRE>
<a name = 2501652> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=02501652&dopt=GenPept">sp|Q47155|DINP_ECOLI</a> DNA-DAMAGE-INDUCIBLE PROTEIN P
           Length = 351
           
 Score = 65.6 bits (157), Expect = 2e-10
 Identities = 74/341 (21%), Positives = 139/341 (40%), Gaps = 41/341 (12%)

Query: 6   DVNSFYASCEKVFRPDLRDRSVVVLSNND--GCVIPRSAEAKKLGIKMGVPWFQLRSAKF 63
           D++ F+A+ E    P LRD  + +  + +  G +   +  A+K G++  +P     + K 
Sbjct: 8   DMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGM--ALKL 65

Query: 64  PEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDF-GRQ 122
              +      +  Y   SN +         R+E  S+DE +LD+     C        ++
Sbjct: 66  CPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQE 125

Query: 123 LREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRTEKLLSLQPV 182
           +R+ + +   LT   G+ P K LAK A   +K   QF       +         L   P+
Sbjct: 126 IRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQF-------VITPAEVPAFLQTLPL 178

Query: 183 EEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNF----NVVLERT----VRELNGES 234
            +I GVG+  + KL  MG+ T   + + +   + K F     ++ ER+     R++N E 
Sbjct: 179 AKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSER 238

Query: 235 CISLEEAPPPKQQIVCSRSFGERV---TTYEAMRQAVCQHAERAAEKLRGERQFCRHIAV 291
                     ++ +   R+  E +   +  EA+ + +    ER   K++ +    R   V
Sbjct: 239 L---------RKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQ-GV 288

Query: 292 FVKTSPFAVTEPYYGNLASEKLLIPTQDTRDIIAAAVRALD 332
            +K   F  T        +++ + P  +  D+IA A +  D
Sbjct: 289 KLKFDDFQQT--------TQEHVWPRLNKADLIATARKTWD 321
</PRE>


<PRE>
<a name = 2501651> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=02501651&dopt=GenPept">sp|P75241|Y360_MYCPN</a> HYPOTHETICAL PROTEIN MG360 HOMOLOG
           Length = 412
           
 Score = 56.6 bits (134), Expect = 9e-08
 Identities = 76/343 (22%), Positives = 145/343 (42%), Gaps = 32/343 (9%)

Query: 1   MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIPR-SAEAKKLGIKMGVPWFQLR 59
           +F   D ++F+AS E++  P+L+++ ++V +     V+   +  A+  GIK G+P    +
Sbjct: 19  LFFYFDFDAFFASVEEIENPELKNQPLIVGNRTSRSVVSTCNYLARSYGIKSGMP--IAK 76

Query: 60  SAKFPEPVIAFSSNYALYASMSNRVMVHL-EELAPRVEQYSIDEMFLDIRGIDSCIDFED 118
           + +     I  +S++  Y   S ++   + E+    V   SIDE F+  R +     F  
Sbjct: 77  ALELCPQAIFATSHFRNYRKYSAKIFAMIAEQFNLEVHTLSIDEGFVCFRDLSPRKAF-S 135

Query: 119 FGRQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRTEKLLS 178
             ++++ HV       I +G+    TLAK     +K +    GV +      KR  KL  
Sbjct: 136 LAKRIQRHVYEQLNFHISIGISNQFTLAKIFSNQAKPF----GVKSCFSKEVKR--KLWP 189

Query: 179 LQPVEEIWGVGRRISKKLNTMGITTALQLARA-NPTFIRKNFNVVLERTVRELNGESCIS 237
           L P+ E+ G+G+R               LA+  + T  ++ F +  E           ++
Sbjct: 190 L-PIVELPGIGKRQLDNAFKNNFHKIGDLAKCKDVTLFKRVFGIAWESL-------HAVA 241

Query: 238 LEEAPPPKQQIVCSRSFGERVT------TYEAMRQAVCQHAERAAEKLRGERQFCRHIAV 291
           L E     +Q V SRS     T      +   ++Q +         +L+   Q C+ + V
Sbjct: 242 LGETYTQSEQDVKSRSIAVSETLEYLNYSSNQLQQKLTSIFNELYARLQLSFQMCKGVVV 301

Query: 292 FVKTSPFAVTEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRI 334
            +K++ F V      N  S+ +   T D + ++    +  +R+
Sbjct: 302 QLKSNDFIV------NSHSQSIKKYTADYQTLLVIVKKLFNRL 338
</PRE>


<PRE>
<a name = 2501650> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=02501650&dopt=GenPept">sp|Q49426|Y360_MYCGE</a> HYPOTHETICAL PROTEIN MG360
           Length = 411
           
 Score = 41.8 bits (96), Expect = 0.002
 Identities = 73/353 (20%), Positives = 152/353 (42%), Gaps = 46/353 (13%)

Query: 1   MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIPR-SAEAKKLGIKMGVPWFQLR 59
           +F   D ++F+AS E++  P+L ++ ++V +     V+   +  A+  GI+ G+    L+
Sbjct: 19  IFLYFDFDAFFASVEELENPELVNQPLIVGNRFSRSVVSTCNYVARSYGIRSGMS--ILK 76

Query: 60  SAKFPEPVIAFSSNYALYASMSNRVMVHLEE-LAPRVEQYSIDEMFLDIRGIDSCIDFED 118
           + +     I   SN+  Y   S R+   +E   + +++  S+DE     + I     F  
Sbjct: 77  ALELCPNAIFAHSNFRNYRKHSKRIFSVIESTFSLKIDVLSVDEGVACFQNISFKKAFL- 135

Query: 119 FGRQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRTEKLLS 178
             ++++  V     + I +G+     +AK     +K +    G+ + ++ + K+  KL  
Sbjct: 136 IAKKIKNFVFQNLRIKISIGISDHFLIAKIFSNQAKPF----GIKSCSVKDIKK--KLWP 189

Query: 179 LQPVEEIWGVGRR----ISK----KLNTMGITTALQLARANPTFIRKNFNVVLERTVREL 230
           L P+ EI G+G +    + K    K+N + +         + + ++K F    E      
Sbjct: 190 L-PITEIPGIGEKHIDLVFKNNFYKINDLAVC-------EDASLLKKVFGNFWESL---- 237

Query: 231 NGESCISLEEAPPPKQQIVCSRSFGERVT------TYEAMRQAVCQHAERAAEKLRGERQ 284
                +SL +        V SRSF    T      +   + + + Q  ++   +L+   Q
Sbjct: 238 ---KAVSLGKWYTDNNNQVKSRSFAVSETLEDLNYSNNQLNKKLTQIFDQLFIRLQLSSQ 294

Query: 285 FCRHIAVFVKTSPFAVTEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVD 337
            C+ I V +K++ F V      N  S K+   + D R +++   R  +R+ ++
Sbjct: 295 VCKGIVVQLKSNDFIV------NSHSNKMKKYSNDYRKLLSITKRLFNRLLIN 341
</PRE>


<PRE>
<a name = 465873> </a><a href="http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve&db=Protein&list_uids=00465873&dopt=GenPept">sp|P34409|YLW6_CAEEL</a> HYPOTHETICAL 59.1 KD PROTEIN F22B7.6 IN CHROMOSOME III
           Length = 518
           
 Score = 34.4 bits (77), Expect = 0.42
 Identities = 25/102 (24%), Positives = 47/102 (45%), Gaps = 4/102 (3%)

Query: 6   DVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIPRSAEAKKLGIKMGVPWFQLRSAKFPE 65
           D+++++A+ E    P LR  +V +   +   +   +  A++ G++ G+P F   S K   
Sbjct: 89  DMDAYFAAVEMRDNPALR--TVPMAVGSSAMLSTSNYLARRFGVRAGMPGFI--SNKLCP 144

Query: 66  PVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSIDEMFLDI 107
            +     NY  Y  +S +      E    V   S+DE F+D+
Sbjct: 145 SLTIVPGNYPKYTKVSRQFSQIFMEYDSDVGMMSLDEAFIDL 186
</PRE>


<PRE>
 Score = 34.0 bits (76), Expect = 0.55
 Identities = 26/88 (29%), Positives = 38/88 (42%), Gaps = 7/88 (7%)

Query: 117 EDFGRQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGVLALTLHNQKRT-EK 175
           E+  R++R  V   TGLT   G+     LAK     +K   Q+       L N K    +
Sbjct: 253 EEAVREIRFRVEQLTGLTCSAGIASNFMLAKICSDLNKPNGQY------VLENDKNAIME 306

Query: 176 LLSLQPVEEIWGVGRRISKKLNTMGITT 203
            L   P+ ++ G+GR    +L  M I T
Sbjct: 307 FLKDLPIRKVGGIGRVCEAQLKAMDIQT 334
</PRE>



<PRE>
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 27, 1999  4:57 PM
  Number of letters in database: 29,652,561
  Number of sequences in database:  82,258
  
Lambda     K      H
   0.321    0.135    0.406 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24755695
Number of Sequences: 82258
Number of extensions: 1024142
Number of successful extensions: 2292
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2264
Number of HSP's gapped (non-prelim): 13
length of query: 424
length of database: 29,652,561
effective HSP length: 51
effective length of query: 373
effective length of database: 25,457,403
effective search space: 9495611319
effective search space used: 9495611319
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 66 (30.1 bits)

</PRE>

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